Build a knowledge graph of biological insights and facts. The graph powers a recommendation system which enables any AstraZeneca scientist to generate novel target hypotheses, for any disease, leveraging all of our data.

Map genetic variant to genes and diseases using functional genomics data.

Find new drug targets leveraging public genetic data.

build a beautiful cv in plain text using HTML/Markdown/CSS

The first paper to use machine learning on microbiome sequencing data for diagnostic purposes.

The analysis used in my Supervised Learning in Microbial Ecology paper, ported to an Ipython notebook.

A PNAS paper on using microfabricated chips to profile the immune system antibody response.

an interactive visualizations of food diary data using D3/crossfilter/dc.js

a quick and dirty command line browser for the LanguaL thesaurus