Computational Omics and Systems Biology Group

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  1. Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono

    C# 240 58

  2. DeepLC: Retention time prediction for peptides carrying any modification.

    Python 74 24

  3. Modular and user-friendly platform for AI-assisted rescoring of peptide identifications

    Python 63 20

  4. Open source Java library for computational proteomics

    Java 34 17

  5. Interpretation of proteomics identification results

    Java 53 18

  6. Highly adaptable common interface for proteomics search and de novo engines

    Java 46 15