Updated deeplabcut installation in colab notebooks by n-poulsen · Pull Request #2376

Updated deeplabcut installation in colab notebooks by n-poulsen · Pull Request #2376 · DeepLabCut/DeepLabCut

Git really does not like notebooks - did not run them locally, only changed cell contents but still vast difference in the pull request.

I tested two versions (where the models train or analyze videos correctly):

COLAB_DEMO_mouse_openfield.ipynb (see the updated file here) which installs by cloning the repo, as it uses the example data:

# Clone the entire deeplabcut repo so we can use the demo data:
!git clone -l -s https://github.com/DeepLabCut/DeepLabCut.git cloned-DLC-repo
%cd cloned-DLC-repo
!ls

%cd /content/cloned-DLC-repo/examples/openfield-Pranav-2018-10-30
!ls

# Install the latest DeepLabCut version (this will take a few minutes to install all the dependencies!)
%cd /content/cloned-DLC-repo/
!pip install ".[tf]"

and COLAB_3miceDemo.ipynb (see the updated file here):

# Install the latest DeepLabCut version:
!pip install "deeplabcut[tf]"