VorontsovIE - Overview

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Ilya Vorontsov VorontsovIE

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@SlonSchool @autosome-ru

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  1. MACRO-APE and PERFECTOS-APE tools

    Java 2 1

  2. Scripts for motif assessment for HOCOMOCO v10/v11.

    Ruby 4

  3. Tools to deal with coverage profile on a transcript level. Allows to analyse ribosome positional preferences (such as polarity score) based on Ribo-Seq data.

    Python 1 1

  4. Web-site for HOCOMOCO collection of transcription factor binding sites motifs.

    Ruby

  5. Benchmarks collection for GRECO TFBS Benchmarking Initiative

    C 3

  6. Pasio is a tool for denoising profiles coming from DNA-sequencing data like ATAC-seq, DNA-seq or ChIP-seq.

    Python 1 3