Ben Evans brevans

• Sarepta Therapeutics

• New Haven, CT
• brevans.dev

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1. Given a vcf and a set of bam files, generate consensus sequences for each individual (taking into account areas of low/no coverage)

   Python 1 1

2. takes a .alleles file and a delimited individual -> population file to make a genepop file w/ haplotypes

   Python 1

4. Adventures in modeling Ae. aegypti dynamics

   Python

5. some python for setting up & analyzing structure runs

   Python

6. Some files and presentation material related to the MPS workshop. I ran the learn linux/python/ngs tools day

   Python