Leandro Hermida hermidalc

• Pittsburgh, PA

Organizations

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1. Framework to build, evaluate, select, and compare ML classification and regression models using high-dimensional biological data and other covariates

   Python 2 1

2. Framework to build, evaluate, select, and compare ML survival analysis models using high-dimensional biological data and other covariates

   Python 1 1

3. A fast, efficient, and accurate functional and taxonomic meta-omic profiler built on Pufferfish and the ccdBG

   Python

4. Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-seq sequencing data for 32 TCGA cancers (Poore et al. Nature 2…

   Python 18 9

5. Kraken2 + Bracken based pipeline for classifying and quantifying microbial reads from GDC TCGA WGS data

   Python 1

6. STAR + edgeR/DESeq2/limma-voom + GSEA RNA-seq gene expression analysis workflow

   Python