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  1. Graphical User Interface for creating NUFEB simulation configurations

    Python

  2. NUFEB development repository

    C++ 8 11

  3. An interactive Jupyter-based tutorial prepared for the de los Reyes lab, interested colleagues, and the North Carolina State University BIT 477/577 Metagenomics course

    Jupyter Notebook

  4. Code, data, and text supporting a paper about quantifying drift vs selection using an agent-based biofilm model

    R 1

  5. Analysis code and smaller datasets for the paper "Controlling Aerobic Biological Floc Size using Couette Taylor Bioreactors"

    PostScript