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1. Python package with helper tools for the nf-core community.

   Python 297 233

2. Repository to host tool-specific module files for the Nextflow DSL2 community!

   Nextflow 405 1k

3. RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

   Nextflow 1.2k 856

4. Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

   Nextflow 555 526

5. Config files used to define parameters specific to compute environments at different Institutions

   Nextflow 108 350

6. Where new ideas for nf-core pipelines, special interest groups and more are proposed

   8 4