qingpeng - Overview
Pinned
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Forked from dib-lab/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
Python
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An Insight Data Engineering Project using Spark, Kafka, ElasticSearch, Redis, Flask, AngularJS
Python 1
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microbial diversity analysis package based on IGS for whole-genome shotgun metagenomic data
Python 2
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Classifying virus DNA sequences using large scale machine learning with Apache Spark
Jupyter Notebook 3
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Forked from dib-lab/2013-khmer-counting
Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"
Jupyter Notebook
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Forked from USDA-ARS-GBRU/vica
Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes
Python 1