ScoreType.NullModel (biojava-legacy 1.9.5 API)

ScoreType.NullModel (biojava-legacy 1.9.5 API)

java.lang.Object
- org.biojava.bio.dp.ScoreType.NullModel

All Implemented Interfaces:

Serializable, ScoreType

Enclosing interface:

ScoreType
```
public static class ScoreType.NullModel
extends Object
implements ScoreType, Serializable
```
In this class, calculateScore returns the probability of a Symbol being emitted by the null model.

Author:

Matthew Pocock

See Also:

Serialized Form

Nested Class Summary
- Nested classes/interfaces inherited from interface org.biojava.bio.dp.ScoreType
  ScoreType.NullModel, ScoreType.Odds, ScoreType.Probability

Field Summary
- Fields inherited from interface org.biojava.bio.dp.ScoreType
  NULL_MODEL, ODDS, PROBABILITY

Constructor Summary

Constructors
Constructor Description

NullModel()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`double`	`calculateScore(Distribution dist, Symbol sym)`	Calculates the score associated with a distribution and a symbol.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - NullModel
```
public NullModel()
```
- Method Detail
  - calculateScore
```
public double calculateScore(Distribution dist,
                             Symbol sym)
                      throws IllegalSymbolException
```
    Description copied from interface: ScoreType
    
    Calculates the score associated with a distribution and a symbol.
    
    Specified by:
    
    calculateScore in interface ScoreType
    
    Throws:
    
    IllegalSymbolException