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SequenceStreamer.FileStreamer (biojava-legacy 1.9.5 API)

  • java.lang.Object
    • org.biojava.bio.program.ssaha.SequenceStreamer.FileStreamer
  • All Implemented Interfaces:
    SequenceStreamer
    Enclosing interface:
    SequenceStreamer
    public static class SequenceStreamer.FileStreamer
extends Object
implements SequenceStreamer

    • Nested Class Summary

      • Nested classes/interfaces inherited from interface org.biojava.bio.program.ssaha.SequenceStreamer

        SequenceStreamer.FileStreamer, SequenceStreamer.SequenceDBStreamer

    • Constructor Summary

      Constructors 
      Constructor Description
      FileStreamer​(SequenceFormat format, SymbolTokenization toke, File f)  
      FileStreamer​(SequenceFormat format, SymbolTokenization toke, List files)  

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      boolean hasNext()  
      void reset()  
      void streamNext​(SeqIOListener listener)  

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • FileStreamer

        public FileStreamer​(SequenceFormat format,
                    SymbolTokenization toke,
                    List files)

      • FileStreamer

        public FileStreamer​(SequenceFormat format,
                    SymbolTokenization toke,
                    File f)

    • Method Detail

      • reset

        public void reset()
        Specified by:
        reset in interface SequenceStreamer

      • hasNext

        public boolean hasNext()
        Specified by:
        hasNext in interface SequenceStreamer

      • streamNext

        public void streamNext​(SeqIOListener listener)
                throws BioException,
                       IOException
        Specified by:
        streamNext in interface SequenceStreamer
        Throws:
        BioException
        IOException