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1. Rachis Framework (Formerly Known as QIIME 2 Framework (Q2F))

   Python 525 258

2. Emperor a tool for the analysis and visualization of large microbial ecology datasets

   JavaScript 54 49

3. Macfusion2

   Objective-C 227 28

4. Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.

   Python 285 259

5. A simple keylogger for macOS

   Objective-C 22 6

6. Doctoral dissertation

   TeX 2 4