MClust version 3.5

Version 3.5.00 4 Feb 2008 
 - ADR
Version 3.5.01 6 Feb 2008 
 - NCST added corrections to WavePC1,2,3
Version 3.5.02 9 Feb 2008 
 - NCST fixed bug in ClearWorkspace re cleaning global variables
 - NCST fixed 32-sample assumption in ShowAverageWaveform
 - NCST added ylim for plotting waveforms global variable
 - ADR created MClustResetGlobalVariables function to bring globals
 into one place 
Version 3.5.03 19 Feb 2008
 - ADR/JCJ added GetName to cluster classes so they can be called correctly
 - ADR renamed wavePC names returned 
 - ADR ClearWorkspace bug fixed
 - ADR Fixed ExportWithColorMerge bug
 - ADR added SetName to access cluster names
 - ADR Fixed CopyCluster
Version 3.5.04 20 Feb 2008
 - ADR ClearWkspace clears undo ptr
 - ADR Cleaned up undo code
 - ADR Added PeakHists
 - ADR Removed extraneous +1 in ShowHistISI
 - ADR Fixed name bug
 - ADR Fixed major SaveClusters when writing files bug
 - ADR Fixed major LoadClusters bug
Version 3.5.05 25 Feb 2008
 - ADR Fixed major export with merge bug
 - ADR Removed exit when exporting from KKwik
Version 3.5.06 26 Feb 2008
 - ADR Fixed several bugs
Version 3.5.07 27 Feb 2008
 - ADR Changed calling methodology of MClustCutter to simplify calls
 - ADR Fixed several bugs
 - ADR Cleaned up ClusterQuality
Version 3.5.08 02 Mar 2008
 - ADR Redid undo mechanism completely
 - ADR Fixed keyboard control in KlustaKwikDecisionWindow
Version 3.5.09 09 Mar 2008
 - ADR/NCST Fixed WaveformCutter undo
 - ADR/NCST cluster name wasn't being carried when convert to mcconvexhull
 - ADR removed those annoying error sounds by making undo/redo windows non-modal
 - ADR fixed undo/redo name bug
 - ADR put filename back in load features text note
 - ADR removed CreateClusterFromDotTFile
Version 3.5.10 15 Mar 2008
 - ADR fixed clear KKC bug
Version 3.5.11 1 Apr 2008
 - ADR fixed Run_KKwik bug
Version 3.5.12 11 Apr 2008
 - ADR mcconvexhull - if no limits, then no points
 - ADR mcconvexhull - changed InPolygon to correctly ID points on the boundaries

VERSION 3.5A.00 19 Apr 2009
 - ADR changed back to only loading in features as they are
       displayed. Surprisingly, this is much faster. 
       
       Time is now a true feature.  Also, Peak and Time return _Peak
       and _Time as names, thus we can no longer assume that names
       match feature files.  Also, since Time only returns a single
       feature, features do not necessarily return 4 features.  Done
       using the concept of "FeatureSources" which is a nF by 2 cell
       array of fd filenames and feature-component-within-the-files.
       This required extensive rewriting of all cluster codes, so 3.5A
       is no longer backwards compatible.

 - ADR added type to add cluster as

 - ADR added delete cluster

 - ADR fixed bug in ConvexHull with points lining up (very rare case
   unless have many many points)

 - ADR fixed bug in InPolygon with points exactly lining up (very rare
   case unless have many many hulls to match)

Version 3.5A.01 26 Apr 2008
 - ADR fixed bug in feature_Peak.  

Version 3.5A.02 1 May 2008
 - ADR fixed bug in Write_fd_file.

Version 3.5A.03 10 May 2008
 - ADR fixed display bug in KlustaKwikCallbacks
 - ADR fixed bug in ParseBatchFile in finding iCV

Version 3.5A.04 29 May 2008
 - ADR fixed FindInClusters bug in KlustaKwikCallbacks (Return Merged)

Version 3.5A.05 28 July 2008
 - ADR added EvalOverlap
 - ADR fixed bug in DeleteLimit when there was no limit to delete

Version 3.5A.06 8 August 2008
 - ADR fixed bug in Run_KlustaKwikCallbacks search too many directories

Version 3.5A.07 8 August 2008
 - ADR removed view(3) in KlustaKwikCallbacks

Version 3.5A.08 13 August 2008
 - ADR Major rewrite of RunKKwik callback.  It was using the old system.
 - ADR Added Merge capability for precuts

Version 3.5A.09 15 August 2008
 - ADR Fixed minor bug in RunKKwik callback.

Version 3.5A.10 26 September 2008
 - ADR Added Time to Batch pre-fd
 - ADR Fixed load precut bug
 - ADR Added findAlignment and SelectAlongFirstDimension to ship

Version 3.5A.11 02 October 2008
 - Incorporated MvdM's RemoveDoubles code
 - Fixed problem with KKwik only found <6 clusters

Version 3.5A.12 08 October 2008
 - undid error fix for license problem with stats toolbox
 - minor fixes to accomodate macs and linux 

Version 3.5A.13 08 October 2008
 - Fixed color bug in Merges

Version 3.5A.14 17 October 2008
 - fixed pathsep -> filesep problem in write_fd_file
 - added ShowAllAverageWaveforms to extras 
 - added CreateClusterFromUnaccountedForPoints
 - fixed bug in ProcessClusters

Version 3.5A.15 26 October 2008
 - wavePC is now WavePC.  This meant that principle components was 
   calculated on a block-by-block and not the same for the whole tetrode
   for multi-block tetrodes
 - Fixed remove doubles to actually target original points

Version 3.5A.16 06 November 2008
 - > thanks to Marijn van Wingerden
   > balances between record_block_size and MaxRecs can result in nB > nF
   > fixed it so that nB is never more than nF.

Version 3.5A.17 02 January 2009
 - Fixed bug if channel validity gets corrupted and is no longer a logical.

Version 3.5A.18 13 August 2009
 - Fixed line 109 in MClust.m (typo)
 - Fixed Klustakwik path and INpath and added which batch file working from

Version 3.5A.19 14 September 2009
 - Fixed line 454/455 in RunClustBatch to use delete correctly.
 - Fixed Mclust to use defaults for channel validity
 - Fixed ResetGlobals to use defaults 

Version 3.5A.20 14 January 2010
 - Fixed double normalization occuring in RunClustBatch
 - Fixed quote problem in RunKKwik_Callbacks

Version 3.5A.21 1 June 2010
 - Added some JCJ files in Extras directories

Version 3.5A.22 2 June 2010
 - Added some JCJ files in Extras directories

Version 3.5A.23 10 June 2010
 - Added Waveform_Density.m back into distribution

Version 3.5B.01 29 November 2010
 - Kevin Daly found major bug in subsampled code.  Fixed by correctly importing from KlustaKwik.  Required changes to documentation as well.

Version 3.5B.02 08 February 2011
 - Randy Bruno found a minor bug in the initialization of the MClust_ChannelValidity checkboxes 

Version 3.5B.03 02 March 2011
 - Randy Bruno found a couple of places where ChannelValidity was being reset and shouldn't have been

Version 3.5B.04 21 November 2011
 - Added ExportClusterOne button to KlustaKwik

Version 3.5B.05 02 July 2013
 - Fixed ydim -> zdim display bug in KlustaKwikCallbacks