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GitHub - PPiMapBuilder/PPiMapBuilderForCy2.8: Cytoscape 2.8 plug-in. Generation of protein-protein interaction network with prediction using protein orthology

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This repository was archived by the owner on Aug 22, 2023. It is now read-only.

PPiMapBuilder

Cytoscape plug-in development (using maven)

##Build

Maven build :

mvn clean install

##Use

The PPiMapBuilder plug-in for Cytoscape 2.8 need an access to a dedicated PPiRetriever PostgreSQL database server. The access configuration for the server need to be set in "server.cfg" placed at root of resources folder.

Example server.cfg:

jdbc:postgresql://HOST/DB_NAME
USER
PASSWORD