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@ParBLiSS

Parallel and Sequential Bioinformatics Libraries for High Throughput Sequences

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  1. Fast Whole-Genome Similarity (ANI) Estimation

    C++ 452 72

  2. Parallel Sequence to Graph Alignment

    C++ 36 4

  3. Parallel k-mer indexing for biological sequences

    C++ 12 13

  4. Computes graph connectivity for large graphs

    C++ 11 2

  5. Distributed Memory De Bruijn Graph Library

    C++ 5

Repositories

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Showing 10 of 15 repositories

  • FastANI Public

    Fast Whole-Genome Similarity (ANI) Estimation

    ParBLiSS/FastANI’s past year of commit activity

    C++

    452

    Apache-2.0

    72 72 5

    Updated Dec 16, 2025

  • ParBLiSS/ParSGA’s past year of commit activity

    C++ 0 0

    0 0

    Updated Apr 29, 2025

  • PairG Public

    Pairing reads on genome graphs

    ParBLiSS/PairG’s past year of commit activity

    C++

    2

    Apache-2.0

    1 0 1

    Updated Feb 2, 2024

  • kmerhash Public

    A parallel DNA k-mer counter based on optimized distributed memory hash tables

    ParBLiSS/kmerhash’s past year of commit activity

    C++

    5

    Apache-2.0

    3 0 0

    Updated May 16, 2023

  • ParBLiSS/Variant_Framework’s past year of commit activity

    C++

    2

    0

    0 0

    Updated Mar 27, 2023

  • PaSGAL Public

    Parallel Sequence to Graph Alignment

    ParBLiSS/PaSGAL’s past year of commit activity

    C++

    36

    MIT

    4 3 0

    Updated Nov 26, 2022

  • ParBLiSS/refcom’s past year of commit activity

    C++ 0 Apache-2.0

    1 1 0

    Updated Mar 8, 2021

  • kmerind Public

    Parallel k-mer indexing for biological sequences

    ParBLiSS/kmerind’s past year of commit activity

    C++

    12

    Apache-2.0

    13 0 0

    Updated Dec 14, 2018

  • psbec Public

    PSbEC is a parallel spectrum-based error correction software.

    ParBLiSS/psbec’s past year of commit activity

    C++ 0 Apache-2.0 0

    0 0

    Updated Dec 5, 2018

  • bruno Public

    Distributed Memory De Bruijn Graph Library

    ParBLiSS/bruno’s past year of commit activity

    C++

    5

    Apache-2.0 0

    2 0

    Updated Aug 24, 2018

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