ajay1685 - Overview

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Ajay Zalavadia ajay1685

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@Imaging-Core

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  1. Convert Aperio SVS files to TIFF or OME-TIFF format using libvips, openslide and netvips.

    Visual Basic .NET 4

  2. Demo extension for QuPath

    Java

  3. Github repository for https://ajay1685.github.io/ page (forked and detached from https://github.com/academicpages/academicpages.github.io)

    JavaScript 4

  4. QuPath - Open-source bioimage analysis for research

    Java 1.3k 337

  5. 3

    This script is used for stitching the component_data.tif files generated by un-mixing workflow in inForm. This

    4

    script uses tifffile to read the metadata (Channel names & colors, spatial calibration and stage cordinates) from

    5

    input files. pyvips (libvips) is used to read the pixel data from image files and create a stitched image. The final stitched image is saved
  6. A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.

    178 28