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@aomlomics

Official GitHub organization of the AOML 'Omics program. AOML is a federal research laboratory of the National Oceanic and Atmospheric Administration (NOAA).

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  1. List of datasets generated by the AOML 'Omics program

    HTML 2

  2. Amplicon sequence processing workflow using QIIME 2 and Snakemake

    Python 45 22

  3. Code to convert eDNA metabarcoding data to Darwin Core for OBIS

    Python 2

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Showing 10 of 44 repositories

  • aomlomics/ocean-dna-explorer’s past year of commit activity

    TypeScript

    1

    0

    4 0

    Updated Mar 23, 2026

  • ODE_server Public

    The external ODE server for long running processes

    aomlomics/ODE_server’s past year of commit activity

    TypeScript 0 0

    0 0

    Updated Mar 21, 2026

  • edna2obis Public

    Code to convert eDNA metabarcoding data to Darwin Core for OBIS

    aomlomics/edna2obis’s past year of commit activity

    Python

    2

    MIT 0

    2 0

    Updated Mar 19, 2026

  • aomlomics/AOML_eDNA_Sampling_Protocol_Sterivex_Dry’s past year of commit activity

    0 0

    0 0

    Updated Mar 18, 2026

  • tourmaline Public

    Amplicon sequence processing workflow using QIIME 2 and Snakemake

    aomlomics/tourmaline’s past year of commit activity

    Python

    45

    BSD-3-Clause

    22 36 1

    Updated Mar 16, 2026

  • protocols Public

    Protocols used by AOML Omics labs, following the BeBOP-OBON standard

    aomlomics/protocols’s past year of commit activity

    Shell

    3

    CC0-1.0

    2 8 0

    Updated Mar 12, 2026

  • aomlomics/labelmaker’s past year of commit activity

    Python

    8 8 2 0

    Updated Mar 4, 2026

  • aomlomics/AOML_PCR_Protocol_Universal-SSU-V4V5-Parada’s past year of commit activity

    0 0

    0 0

    Updated Feb 6, 2026

  • aomlomics/FAIReSheets’s past year of commit activity

    Python

    7

    0

    2 0

    Updated Feb 2, 2026

  • aomlomics/AOML_MetaG_LibPrep_Protocol_Illumina’s past year of commit activity

    0 0

    0 0

    Updated Jan 27, 2026

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