Computational tools for the Human Cell Atlas
a list of collaborative computational projects supported by CZI
Here is a sample template you can copy and paste to add your project:
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|---|---|
| [name](link to repo) | description of the project | Jeremy Freeman, PhD @ CZI Science |
| [another project name](link to repo) | description of the project | Joe Hand and Danielle Robinson, PhD @ CS&S |
Bioconductor
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Cell Type
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Cell State
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Compression
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Imaging
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Latent Spaces
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|---|---|
| Tybalt | Variational Autoencoder for Gene Expression (Paper) | Greg Way, Qiwen Hu, and Casey Greene @Greenelab @Penn |
Manifold Alignment
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Multiomics
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Population Variation
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Portals
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Scale
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|
Trajectories
| TITLE | DESCRIPTION | PEOPLE & AFFILIATIONS |
|---|