Jorge Langa jlanga

💭

Organizations

Pinned Loading

1. Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools

   Python 3 1

2. smsk smsk Public template

   Snakemake skeleton - Build workflows with Snakemake

   Python 19 6

3. Transcriptome assembly via digital normalization with khmer and Trinity

   Python 4 2

4. Pipeline to annotate a transcriptome assembly, coding and noncoding parts.

   R 1 1

5. Snakemake project to predict orthogroups and find patterns of postive selection with orthofinder and fastcodeml

   C++ 7 1

6. Snakemake workflow to run transdecoder + trinotate

   Python 8 2