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OpenWorm

OpenWorm

An open-source project dedicated to creating a virtual C. elegans nematode in a computer.

An overview of the core repositories in the project, along with the current status of automated testing, can be found here.

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  1. Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    Python 2.9k 222

  2. OpenWorm main website

    HTML 29 34

  3. Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.

    Python 216 50

  4. The c302 framework for generating multiscale network models of C. elegans

    Python 135 32

  5. Tools and curated datasets to build quantitative models of C. elegans ion channels

    Jupyter Notebook 11 4

Repositories

Showing 10 of 109 repositories

  • openworm.ai Public

    Scripts related to use of LLMs and other AI technology in OpenWorm

    openworm/openworm.ai’s past year of commit activity

    HTML

    3

    MIT

    3 2 1

    Updated Mar 4, 2026

  • openworm_docs Public

    Documentation for OpenWorm, i.e. docs.openworm.org

    openworm/openworm_docs’s past year of commit activity

    Python

    44 26 13 1

    Updated Mar 2, 2026

  • openworm/CE_locomotion’s past year of commit activity

    C++

    2 5 7 2

    Updated Mar 1, 2026

  • c302 Public

    The c302 framework for generating multiscale network models of C. elegans

    openworm/c302’s past year of commit activity

  • ConnectomeToolbox Public

    Information on published connectomics data related to C. elegans

    openworm/ConnectomeToolbox’s past year of commit activity

    Python

    4

    MIT

    7 2 0

    Updated Feb 20, 2026

  • Blender2NeuroML Public

    Conversion script to bring neuron models created in Blender into NeuroML format

    openworm/Blender2NeuroML’s past year of commit activity

    Python

    17

    MIT

    5 2 0

    Updated Feb 17, 2026

  • sibernetic Public

    This is a C++/OpenCL implementation of the PCISPH algorithm supplemented with a set of biomechanics related features applied to C. elegans locomotion

    openworm/sibernetic’s past year of commit activity

  • wormbrowser Public

    The Worm Browser -- a 3D browser of the cellular anatomy of the c. elegans

    openworm/wormbrowser’s past year of commit activity

    JavaScript

    49 12 1 1

    Updated Feb 13, 2026

  • OpenWorm Public

    Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

    openworm/OpenWorm’s past year of commit activity

  • openworm/openworm.github.io’s past year of commit activity

    HTML

    29 34 17 1

    Updated Feb 1, 2026