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  1. Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling

    Python 341 36

  2. Clair3-Trio: variant calling in trio using Nanopore long-reads

    Python 16 1

  3. RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion

    Jupyter Notebook 29 3

  4. ClusterV: finding HIV quasispecies and drug resistance from ONT sequencing data

    Python 12

  5. variant calling using with sequencing data from multiple platforms

    Python 8 3

  6. Comprehensive pipeline for detection of TB from ONT adaptive sequencing and amplicon data.

    Nextflow 5 1