QuPath

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QuPath - Open-source bioimage analysis for research

Java 1.3k 337
QuPath documentation

Python 21 25
QuPath extension to run StarDist nucleus detection

Java 48 7
A QuPath extension for working with Deep Java Library (https://djl.ai)

Java 9 7
QuPath extension to work with images through OMERO's web API

Java 10 11
A QuPath extension for working with the Bioimage Model Zoo (https://bioimage.io)

Java 6 3

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qupath Public
QuPath - Open-source bioimage analysis for research

qupath/qupath’s past year of commit activity
qupath/qupath-extension-bioimageio’s past year of commit activity

Java
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Apache-2.0
3 2 0
Updated Mar 31, 2026
qupath/qupath-bioimageio-spec’s past year of commit activity

Java 0 MIT
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Updated Mar 30, 2026
qupath/qupath-extension-omero’s past year of commit activity

Java
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Apache-2.0
2 3 0
Updated Mar 27, 2026
qupath-catalog Public
The catalog containing QuPath extensions developed by the QuPath team

qupath/qupath-catalog’s past year of commit activity

1
Apache-2.0
2 2 1
Updated Mar 25, 2026
qupath/qupath.github.io’s past year of commit activity

SCSS
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MIT
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qupath/qupath-extension-template’s past year of commit activity

Java
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Updated Mar 19, 2026
qupath/qupath-extension-stitching’s past year of commit activity

Java
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qupath/libczi-jars’s past year of commit activity

0 0
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qupath/qupath-gradle-scripting-project’s past year of commit activity

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Updated Mar 9, 2026

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